Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase ptsi | YDC107_RS04885 | Not Available | Positive | 984732 - 986459 | 63537.5 |
| pts glucose transporter subunit iia | YDC107_RS04890 | Not Available | Positive | 986500 - 987009 | 18252.1 |
| pyridoxine/pyridoxal/pyridoxamine kinase | YDC107_RS04895 | Not Available | Negative | 987051 - 987902 | 30862.2 |
| yfek family protein | YDC107_RS04900 | Not Available | Positive | 988007 - 988375 | 13564.6 |
| cysteine synthase b | YDC107_RS04905 | Not Available | Negative | 988378 - 989289 | 32605.2 |
| sulfate/thiosulfate abc transporter atp-binding protein cysa | YDC107_RS04910 | Not Available | Negative | 989423 - 990520 | 41061.4 |
| sulfate/thiosulfate abc transporter permease cysw | YDC107_RS04915 | Not Available | Negative | 990510 - 991385 | 32539.6 |
| sulfate/thiosulfate abc transporter permease cyst | YDC107_RS04920 | Not Available | Negative | 991385 - 992218 | 30310.5 |
| thiosulfate/sulfate abc transporter substrate-binding protein cysp | YDC107_RS04925 | Not Available | Negative | 992218 - 993234 | 37644.6 |
| sdr family oxidoreductase ucpa | YDC107_RS04930 | Not Available | Negative | 993405 - 994196 | 27865.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





