Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit m | YDC107_RS04190 | Not Available | Negative | 840011 - 841540 | 56555.0 |
| nadh-quinone oxidoreductase subunit l | YDC107_RS04195 | Not Available | Negative | 841771 - 843612 | 66412.1 |
| nadh-quinone oxidoreductase subunit nuok | YDC107_RS04200 | Not Available | Negative | 843609 - 843911 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | YDC107_RS04205 | Not Available | Negative | 843908 - 844462 | 19875.9 |
| nadh-quinone oxidoreductase subunit nuoi | YDC107_RS04210 | Not Available | Negative | 844474 - 845016 | 20538.9 |
| nadh-quinone oxidoreductase subunit nuoh | YDC107_RS04215 | Not Available | Negative | 845031 - 846008 | 36221.3 |
| nadh-quinone oxidoreductase subunit nuog | YDC107_RS04220 | Not Available | Negative | 846005 - 848731 | 100251.0 |
| nadh-quinone oxidoreductase subunit nuof | YDC107_RS04225 | Not Available | Negative | 848784 - 850121 | 49311.2 |
| nadh-quinone oxidoreductase subunit nuoe | YDC107_RS04230 | Not Available | Negative | 850118 - 850618 | 18591.1 |
| nadh-quinone oxidoreductase subunit c/d | YDC107_RS04235 | Not Available | Negative | 850621 - 852423 | 68728.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





