Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iibc | YDC107_RS03655 | Not Available | Negative | 711901 - 713592 | 57538.6 |
| 1-phosphofructokinase | YDC107_RS03660 | Not Available | Negative | 713609 - 714547 | 33757.6 |
| fused pts fructose transporter subunit iia/hpr protein | YDC107_RS03665 | Not Available | Negative | 714547 - 715677 | 39649.2 |
| sugar efflux transporter setb | YDC107_RS03670 | Not Available | Positive | 716045 - 717226 | 42706.6 |
| ykgj family cysteine cluster protein | YDC107_RS03675 | Not Available | Negative | 717223 - 717477 | 8954.96 |
| elongation factor p-like protein yeip | YDC107_RS03680 | Not Available | Positive | 717632 - 718204 | 21533.9 |
| mannitol dehydrogenase family protein | YDC107_RS03685 | Not Available | Positive | 718427 - 719893 | 53976.7 |
| zinc-binding gtpase yeir | YDC107_RS03690 | Not Available | Positive | 720011 - 720997 | 36172.3 |
| kdo(2)-lipid a phosphotransferase | YDC107_RS03695 | Not Available | Positive | 721036 - 721749 | 26759.7 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | YDC107_RS03700 | Not Available | Positive | 722161 - 722727 | 21041.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





