Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | YDC107_RS27960 | Not Available | Negative | 1073087 - 1073239 | 5689.89 |
| Hypothetical protein | YDC107_RS05305 | Not Available | Positive | 1073257 - 1073448 | 7462.05 |
| Putative outer membrane lipoprotein | YDC107_RS05310 | Not Available | Positive | 1073759 - 1074277 | 17734.1 |
| Hypothetical protein | YDC107_RS05315 | Not Available | Positive | 1074293 - 1074832 | 20260.5 |
| Hypothetical protein | YDC107_RS05320 | Not Available | Negative | 1075052 - 1075534 | 18228.5 |
| Putative endolysin | YDC107_RS05325 | Not Available | Negative | 1075531 - 1076160 | 23062.5 |
| Putative holin | YDC107_RS05330 | Not Available | Negative | 1076150 - 1076458 | 11333.2 |
| Hypothetical protein | YDC107_RS05335 | Not Available | Negative | 1076445 - 1076849 | 14295.6 |
| Putative tail fiber | YDC107_RS05340 | Not Available | Negative | 1077256 - 1080231 | 108071.0 |
| Hypothetical protein | YDC107_RS05345 | Not Available | Positive | 1080427 - 1080684 | 9698.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





