Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain YDC107 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1284644 bp
Thymine Count
1281806 bp
Guanine Count
1314426 bp
Cytosine Count
1317435 bp
Genome Length
5198311 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
468 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail component | YDC107_RS00005 | Not Available | + | 49 - 437 | 14191.7 |
| Tail component | YDC107_RS00010 | Not Available | + | 430 - 3005 | 89256.2 |
| Tail component | YDC107_RS00015 | Not Available | + | 3002 - 3330 | 11709.5 |
| Tail component | YDC107_RS00020 | Not Available | + | 3330 - 4026 | 25342.6 |
| Tail fiber component | YDC107_RS00025 | Not Available | + | 4032 - 4778 | 25562.2 |
| Tail component | YDC107_RS00030 | Not Available | + | 4775 - 5346 | 20829.5 |
| Putative tail tip assembly protein | YDC107_RS28280 | Not Available | + | 5408 - 8886 | 126127.0 |
| Putative lom-like outer membrane protein | YDC107_RS00070 | Not Available | + | 8954 - 9553 | 21343.7 |
| Tail fiber protein | YDC107_RS00075 | Not Available | + | 9618 - 11995 | 82656.6 |
| Hypothetical protein | YDC107_RS00080 | Not Available | + | 11995 - 12276 | 10708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





