Acinetobacter schindleri strain SGAir0122

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter schindleri strain SGAir0122 is a Gram-negative bacterium identified in the rhizomes of plants, specifically associated with Zingiber officinale (ginger) and Pseudostellaria heterophylla. This strain is characterized by having a single replicon, which is significant in understanding its genomic organization and stability. The habitat of this bacterium, found in the rhizomes, suggests a potential role in the rhizosphere, where it may interact with plant roots and contribute to the microbial community surrounding these plants. The association with Zingiber officinale and Pseudostellaria heterophylla indicates that Acinetobacter schindleri could be involved in plant health and possibly in the nutrient cycling within these specific ecosystems. The accession number for this strain is NZ_CP025619.2, which provides a reference for further genomic studies and comparisons with other strains within the Acinetobacter genus. Understanding the ecological role of Acinetobacter schindleri strain SGAir0122 may shed light on its functions in the rhizosphere, including potential benefits to host plants, such as nutrient acquisition or disease resistance. In summary, Acinetobacter schindleri strain SGAir0122 exemplifies how specific bacteria can inhabit unique ecological niches, interact with host plants, and contribute to the overall health of the rhizome ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter schindleri
Strainstrain SGAir0122

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter schindleri strain SGAir0122
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizomes
Biotic relationshipNot Available
Host(s)Zingiber officinale, Pseudostellaria heterophylla
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122,

Gene Summary

Adenine Count

47315 bp

Thymine Count

47411 bp

Guanine Count

31864 bp

Cytosine Count

29640 bp

Genome Length

156230 bp

Protein-coding Genes

149 genes

Non-Coding Genes

13 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiation protein repmC0119_RS15255Not AvailablePositive67324 - 6827136442.3
is3 family transposaseC0119_RS15260Not AvailablePositive68602 - 6973443450.4
is3 family transposaseC0119_RS15265Not AvailableNegative70782 - 7185742143.8
sigma-54-dependent fis family transcriptional regulatorC0119_RS15270Not AvailablePositive72230 - 7402668048.1
transporterC0119_RS15275Not AvailablePositive74401 - 7528232936.6
benzaldehyde dehydrogenaseC0119_RS15280Not AvailablePositive75384 - 7683851531.9
nad(p)-dependent alcohol dehydrogenaseC0119_RS15285Not AvailablePositive76872 - 7797838653.8
cupin domain-containing proteinC0119_RS15290Not AvailablePositive78073 - 7845314334.1
is5 family transposaseC0119_RS15295Not AvailablePositive78621 - 7955335968.5
isl3-like element isppu12 family transposaseC0119_RS15300Not AvailablePositive79617 - 798026569.95

Displaying genes 91 – 100 of 162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.