Niveispirillum cyanobacteriorum strain TH16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Niveispirillum

Description

Niveispirillum cyanobacteriorum strain TH16 is characterized by possessing four replicons, which suggests a complex genomic organization that may facilitate its adaptability and functional diversity. The strain is cataloged under several accessions: NZ_CP025611.1, NZ_CP025612.1, NZ_CP025613.1, and NZ_CP025614.1. These accessions refer to distinct genomic segments, which could imply a polyploid genome structure or the presence of plasmids alongside the chromosomal DNA. The multiple replicons may contribute to the organism's ability to thrive in various environmental conditions, potentially enhancing its resilience and metabolic capabilities. This genomic arrangement can be advantageous in natural ecosystems, where adaptability is crucial for survival amid changing conditions. In terms of ecological impact, Niveispirillum cyanobacteriorum strain TH16 may play a significant role in aquatic environments, contributing to primary productivity and nutrient cycling. Its cyanobacterial lineage suggests involvement in photosynthesis and possibly nitrogen fixation, which are vital processes in maintaining ecosystem health. Understanding the genomic features of this strain can provide insights into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusNiveispirillum
SpeciesNiveispirillum cyanobacteriorum
Strainstrain TH16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niveispirillum cyanobacteriorum strain TH16 chromosome eg_2,

Gene Summary

Adenine Count

231394 bp

Thymine Count

233748 bp

Guanine Count

394674 bp

Cytosine Count

394705 bp

Genome Length

1254521 bp

Protein-coding Genes

1030 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dotu family type iv/vi secretion system proteinC0V82_RS13155Not AvailablePositive2832922 - 283375830721.1
type vi secretion protein icmf/tssm n-terminal domain-containing proteinC0V82_RS13160Not AvailablePositive2833755 - 2837888149730.0
type vi secretion system protein tssaC0V82_RS13165Not AvailablePositive2837888 - 283900340278.7
type vi secretion system contractile sheath small subunitC0V82_RS13170Not AvailablePositive2839154 - 283965718815.7
type vi secretion system contractile sheath large subunitC0V82_RS13175Not AvailablePositive2839734 - 284117653596.8
hcp family type vi secretion system effectorC0V82_RS13180Not AvailablePositive2841255 - 284175518111.1
type vi secretion system baseplate subunit tsseC0V82_RS13185Not AvailablePositive2841958 - 284253320896.2
type vi secretion system baseplate subunit tssfC0V82_RS13190Not AvailablePositive2842523 - 284437369058.7
type vi secretion system baseplate subunit tssgC0V82_RS13195Not AvailablePositive2844337 - 284537137868.8
duf4157 domain-containing proteinC0V82_RS13200Not AvailablePositive2845462 - 284650836126.1

Displaying genes 3941 – 3950 of 5236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.