Salmonella enterica subsp. enterica serovar Agona strain

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Agona is a Gram-negative bacterium characterized by its spirilla shape and microaerophilic oxygen requirement. This strain typically exists in host-associated environments, indicating its affiliation with various hosts. It is a chemoorganotroph, deriving energy from organic compounds. The organism is notable for its cell arrangement, which can be observed as chains or singles. This strain has a singular replicon and is distinguished by the presence of flagella, enabling motility, although its overall mobility is described as absent. S. enterica serovar Agona thrives optimally at a temperature of 37°C, which places it within the mesophilic temperature range. In terms of ecological context, S. enterica subsp. enterica serovar Agona demonstrates a free-living biotic relationship, suggesting its potential to survive outside of host organisms under suitable environmental conditions. The dual membrane structure typical of Gram-negative bacteria further enhances its adaptability and survival mechanisms in diverse habitats. Understanding the traits of Salmonella enterica serovar Agona provides valuable insight into its ecological role and pathogenic potential, especially considering its association with hosts and its ability to thrive in microaerophilic conditions. The strain's accessions, such as NZ_CP025451.1, contribute to its identification within microbiological databases, aiding in research and public health monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Agona strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Agona strain
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Agona strain

Gene Summary

Adenine Count

1143027 bp

Thymine Count

1138204 bp

Guanine Count

1239815 bp

Cytosine Count

1242883 bp

Genome Length

4763929 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-rhamnonate dehydrataseCYL28_RS11550Not AvailableNegative2349424 - 235062944122.0
iclr family transcriptional regulatorCYL28_RS11555Not AvailableNegative2350643 - 235142529206.4
nicotinamide mononucleotide deamidase-related protein yfayCYL28_RS11560Not AvailableNegative2351675 - 235287143893.8
yfaz family proteinCYL28_RS11565Not AvailableNegative2352986 - 235352818640.7
nucleoside triphosphatase nudiCYL28_RS11570Not AvailablePositive2353807 - 235423216334.5
lipopolysaccharide core heptose(ii)-phosphate phosphatase pmrgCYL28_RS11575Not AvailableNegative2354277 - 235488221968.5
udp-4-amino-4-deoxy-l-arabinose aminotransferaseCYL28_RS11580Not AvailablePositive2355181 - 235632041154.4
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseCYL28_RS11585Not AvailablePositive2356323 - 235730636518.5
bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arnaCYL28_RS11590Not AvailablePositive2357303 - 235928573441.0
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseCYL28_RS11595Not AvailablePositive2359282 - 236018133078.8

Displaying genes 2391 – 2400 of 4605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.