Salmonella enterica subsp. enterica serovar Agona strain

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Agona is a Gram-negative bacterium characterized by its spirilla shape and microaerophilic oxygen requirement. This strain typically exists in host-associated environments, indicating its affiliation with various hosts. It is a chemoorganotroph, deriving energy from organic compounds. The organism is notable for its cell arrangement, which can be observed as chains or singles. This strain has a singular replicon and is distinguished by the presence of flagella, enabling motility, although its overall mobility is described as absent. S. enterica serovar Agona thrives optimally at a temperature of 37°C, which places it within the mesophilic temperature range. In terms of ecological context, S. enterica subsp. enterica serovar Agona demonstrates a free-living biotic relationship, suggesting its potential to survive outside of host organisms under suitable environmental conditions. The dual membrane structure typical of Gram-negative bacteria further enhances its adaptability and survival mechanisms in diverse habitats. Understanding the traits of Salmonella enterica serovar Agona provides valuable insight into its ecological role and pathogenic potential, especially considering its association with hosts and its ability to thrive in microaerophilic conditions. The strain's accessions, such as NZ_CP025451.1, contribute to its identification within microbiological databases, aiding in research and public health monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Agona strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Agona strain
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Agona strain

Gene Summary

Adenine Count

1143027 bp

Thymine Count

1138204 bp

Guanine Count

1239815 bp

Cytosine Count

1242883 bp

Genome Length

4763929 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsskCYL28_RS05195Not AvailableNegative1103076 - 110440749717.4
type vi secretion system lipoprotein tssjCYL28_RS05200Not AvailableNegative1104410 - 110494319584.2
type vi secretion system-associated fha domain protein taghCYL28_RS05205Not AvailableNegative1104940 - 110622647475.7
type vi secretion system baseplate subunit tssgCYL28_RS05210Not AvailableNegative1106251 - 110733940396.2
type vi secretion system baseplate subunit tssfCYL28_RS05215Not AvailableNegative1107303 - 110915670582.2
type vi secretion system baseplate subunit tsseCYL28_RS05220Not AvailableNegative1109161 - 110957715709.5
type vi secretion system contractile sheath large subunitCYL28_RS05225Not AvailableNegative1109574 - 111104655351.7
type vi secretion system contractile sheath small subunitCYL28_RS05235Not AvailableNegative1111337 - 111184018368.6
hcp family type vi secretion system effectorCYL28_RS05240Not AvailablePositive1112469 - 111298719297.8
type vi secretion system tip protein vgrgCYL28_RS05245Not AvailablePositive1113210 - 111535179535.5

Displaying genes 1171 – 1180 of 4605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.