Salmonella enterica subsp. enterica serovar Agona strain

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Agona is a Gram-negative bacterium characterized by its spirilla shape and microaerophilic oxygen requirement. This strain typically exists in host-associated environments, indicating its affiliation with various hosts. It is a chemoorganotroph, deriving energy from organic compounds. The organism is notable for its cell arrangement, which can be observed as chains or singles. This strain has a singular replicon and is distinguished by the presence of flagella, enabling motility, although its overall mobility is described as absent. S. enterica serovar Agona thrives optimally at a temperature of 37°C, which places it within the mesophilic temperature range. In terms of ecological context, S. enterica subsp. enterica serovar Agona demonstrates a free-living biotic relationship, suggesting its potential to survive outside of host organisms under suitable environmental conditions. The dual membrane structure typical of Gram-negative bacteria further enhances its adaptability and survival mechanisms in diverse habitats. Understanding the traits of Salmonella enterica serovar Agona provides valuable insight into its ecological role and pathogenic potential, especially considering its association with hosts and its ability to thrive in microaerophilic conditions. The strain's accessions, such as NZ_CP025451.1, contribute to its identification within microbiological databases, aiding in research and public health monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Agona strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Agona strain
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Agona strain

Gene Summary

Adenine Count

1143027 bp

Thymine Count

1138204 bp

Guanine Count

1239815 bp

Cytosine Count

1242883 bp

Genome Length

4763929 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system effector sopd2CYL28_RS04590Not AvailablePositive967967 - 96892638002.5
formate c-acetyltransferaseCYL28_RS04595Not AvailableNegative968999 - 97128185009.5
formate transporter focaCYL28_RS04600Not AvailableNegative971341 - 97219830970.6
30s ribosomal protein s12 methylthiotransferase accessory factor ycaoCYL28_RS04605Not AvailableNegative972603 - 97436365329.8
duf421 domain-containing proteinCYL28_RS04610Not AvailablePositive974500 - 97519226088.2
3-phosphoserine/phosphohydroxythreonine transaminaseCYL28_RS04615Not AvailablePositive975378 - 97646639857.5
3-phosphoshikimate 1-carboxyvinyltransferaseCYL28_RS04620Not AvailablePositive976537 - 97782046174.8
m48 family metallopeptidaseCYL28_RS04625Not AvailablePositive977963 - 97872426790.8
(d)cmp kinaseCYL28_RS04630Not AvailablePositive978897 - 97958024761.7
30s ribosomal protein s1CYL28_RS04635Not AvailablePositive979694 - 98136761176.4

Displaying genes 1051 – 1060 of 4605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.