Ethanoligenens harbinense strain X-29

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ethanoligenens

Description

Ethanoligenens harbinense strain X-29 is a Gram-positive, anaerobic, rod-shaped bacterium that thrives in the caeca of its host, Homo sapiens. This organism is characterized by its mesophilic nature, with an optimal growth temperature of 37°C, indicating a preference for moderate temperature environments typical of the human gut. E. harbinense strain X-29 is notable for its non-spore-forming capability, which suggests that it relies on other survival strategies rather than sporulation to endure unfavorable conditions. Additionally, the strain possesses a single replicon, indicating a simpler genetic organization compared to other more complex organisms. The accession number NZ_CP025288.1 provides a reference for its genomic data, facilitating further research and studies. Understanding the ecological role of E. harbinense strain X-29 can provide insights into the microbial dynamics within the human gut. Given its anaerobic nature and adaptation to the caeca, this bacterium likely contributes to the fermentation processes that occur in this niche, playing a role in the digestion of complex carbohydrates and the overall metabolic activities of the gut microbiome. Such activities can influence host health, nutrient absorption, and may have implications for gut-related diseases.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusEthanoligenens
SpeciesEthanoligenens harbinense
Strainstrain X-29

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
Habitatcaeca
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ethanoligenens harbinense strain X-29 chromosome, complete genome.

Gene Summary

Adenine Count

690622 bp

Thymine Count

689299 bp

Guanine Count

855169 bp

Cytosine Count

865033 bp

Genome Length

3100123 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseCN246_RS14140Not AvailablePositive2929333 - 293017229912.9
shikimate kinaseCN246_RS14145Not AvailablePositive2930176 - 293072119649.9
3-deoxy-7-phosphoheptulonate synthaseCN246_RS14150Not AvailablePositive2931068 - 293207836620.3
prephenate dehydrogenaseCN246_RS14155Not AvailablePositive2932091 - 293294830469.4
3-dehydroquinate synthaseCN246_RS14160Not AvailablePositive2933053 - 293411437503.3
3-phosphoshikimate 1-carboxyvinyltransferaseCN246_RS14165Not AvailablePositive2934292 - 293556944191.4
chorismate synthaseCN246_RS14170Not AvailablePositive2935550 - 293664738661.9
bifunctional chorismate mutase/prephenate dehydrataseCN246_RS14175Not AvailablePositive2936634 - 293777642297.8
phosphopyruvate hydrataseCN246_RS14180Not AvailableNegative2937907 - 293919945918.6
yvek family proteinCN246_RS14185Not AvailablePositive2939577 - 294028725501.8

Displaying genes 2821 – 2830 of 2973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.