Ethanoligenens harbinense strain X-29

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ethanoligenens

Description

Ethanoligenens harbinense strain X-29 is a Gram-positive, anaerobic, rod-shaped bacterium that thrives in the caeca of its host, Homo sapiens. This organism is characterized by its mesophilic nature, with an optimal growth temperature of 37°C, indicating a preference for moderate temperature environments typical of the human gut. E. harbinense strain X-29 is notable for its non-spore-forming capability, which suggests that it relies on other survival strategies rather than sporulation to endure unfavorable conditions. Additionally, the strain possesses a single replicon, indicating a simpler genetic organization compared to other more complex organisms. The accession number NZ_CP025288.1 provides a reference for its genomic data, facilitating further research and studies. Understanding the ecological role of E. harbinense strain X-29 can provide insights into the microbial dynamics within the human gut. Given its anaerobic nature and adaptation to the caeca, this bacterium likely contributes to the fermentation processes that occur in this niche, playing a role in the digestion of complex carbohydrates and the overall metabolic activities of the gut microbiome. Such activities can influence host health, nutrient absorption, and may have implications for gut-related diseases.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusEthanoligenens
SpeciesEthanoligenens harbinense
Strainstrain X-29

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
Habitatcaeca
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ethanoligenens harbinense strain X-29 chromosome, complete genome.

Gene Summary

Adenine Count

690622 bp

Thymine Count

689299 bp

Guanine Count

855169 bp

Cytosine Count

865033 bp

Genome Length

3100123 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydropyrimidinaseCN246_RS06065Not AvailablePositive1286889 - 128826850646.1
hypothetical proteinCN246_RS06070Not AvailablePositive1288310 - 128908027157.9
nad-dependent dihydropyrimidine dehydrogenase subunit preaCN246_RS06075Not AvailablePositive1289077 - 129028244060.1
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeCN246_RS06080Not AvailablePositive1290356 - 129169949509.7
zn-dependent hydrolaseCN246_RS06085Not AvailablePositive1291730 - 129295044621.8
spy0128 family proteinCN246_RS06090Not AvailableNegative1293159 - 1296587118645.0
afsr/sarp family transcriptional regulatorCN246_RS06095Not AvailableNegative1296970 - 129818146951.5
Trna-glnNot AvailableNot AvailablePositive1298513 - 1298586Not Available
duf4097 family beta strand repeat-containing proteinCN246_RS06105Not AvailableNegative1298749 - 129968732710.9
permease prefix domain 1-containing proteinCN246_RS06110Not AvailableNegative1299680 - 130032424640.7

Displaying genes 1301 – 1310 of 2973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.