Ethanoligenens harbinense strain X-29

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ethanoligenens

Description

Ethanoligenens harbinense strain X-29 is a Gram-positive, anaerobic, rod-shaped bacterium that thrives in the caeca of its host, Homo sapiens. This organism is characterized by its mesophilic nature, with an optimal growth temperature of 37°C, indicating a preference for moderate temperature environments typical of the human gut. E. harbinense strain X-29 is notable for its non-spore-forming capability, which suggests that it relies on other survival strategies rather than sporulation to endure unfavorable conditions. Additionally, the strain possesses a single replicon, indicating a simpler genetic organization compared to other more complex organisms. The accession number NZ_CP025288.1 provides a reference for its genomic data, facilitating further research and studies. Understanding the ecological role of E. harbinense strain X-29 can provide insights into the microbial dynamics within the human gut. Given its anaerobic nature and adaptation to the caeca, this bacterium likely contributes to the fermentation processes that occur in this niche, playing a role in the digestion of complex carbohydrates and the overall metabolic activities of the gut microbiome. Such activities can influence host health, nutrient absorption, and may have implications for gut-related diseases.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusEthanoligenens
SpeciesEthanoligenens harbinense
Strainstrain X-29

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
Habitatcaeca
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ethanoligenens harbinense strain X-29 chromosome, complete genome.

Gene Summary

Adenine Count

690622 bp

Thymine Count

689299 bp

Guanine Count

855169 bp

Cytosine Count

865033 bp

Genome Length

3100123 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

189 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix domain-containing proteinCN246_RS04775Not AvailablePositive1013375 - 101392020200.2
diaminopimelate epimeraseCN246_RS04780Not AvailablePositive1014054 - 101489930852.3
ll-diaminopimelate aminotransferaseCN246_RS04785Not AvailablePositive1014948 - 101614443514.4
gnat family n-acetyltransferaseCN246_RS04790Not AvailableNegative1016220 - 101650410694.7
hypothetical proteinCN246_RS04795Not AvailableNegative1016534 - 10168099904.04
amidohydrolaseCN246_RS04800Not AvailablePositive1017785 - 101909246812.2
3-isopropylmalate dehydrogenaseCN246_RS04805Not AvailableNegative1019533 - 102061238567.7
3-isopropylmalate dehydratase small subunitCN246_RS04810Not AvailableNegative1020627 - 102111817613.1
3-isopropylmalate dehydratase large subunitCN246_RS04815Not AvailableNegative1021140 - 102239644512.0
citramalate synthaseCN246_RS04820Not AvailableNegative1022466 - 102402556113.0

Displaying genes 1041 – 1050 of 2973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.