Komagataeibacter xylinus strain DSM 2325

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Komagataeibacter

Description

Komagataeibacter xylinus strain DSM 2325 is a Gram-negative, rod-shaped bacterium primarily found in various habitats associated with alcoholic beverages, including fermented beverages, wine vinegar, and spoiled wine. This strain can also inhabit the carposphere of climacteric and non-climacteric fruits, as well as vegetables and rotten fruit, indicating its adaptability to diverse environments. As an aerobic organism, K. xylinus DSM 2325 requires oxygen for growth, which aligns with its presence in open environments where fermentation processes occur. The bacterium has three replicons, suggesting a complex genetic structure that may contribute to its metabolic versatility. Notably, this strain has been identified in association with Malus domestica (apple), highlighting its potential role in the fermentation processes related to fruit-based products. The presence of K. xylinus in these environments may facilitate the production of cellulose, which is an important biopolymer used in various applications, including food and biotechnology. The ecological insight provided by the traits of K. xylinus DSM 2325 underscores its significance in the fermentation processes of fruit and beverages, where it likely plays a role in the microbial dynamics and quality of these products. Its ability to thrive in spoiled or rotten substrates also suggests a role in the decomposition processes, contributing to nutrient cycling in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusKomagataeibacter
SpeciesKomagataeibacter xylinus
Strainstrain DSM 2325

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatalcoholic beverages; carposphere; climacteric and non-climacteric fruit; fermented beverages; fruit; fruit juices; rotten fruit; spoiled wine; vegetables; wine vinegar
Biotic relationshipNot Available
Host(s)Malus domestica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Komagataeibacter xylinus strain DSM 2325 plasmid unnamed2,

Gene Summary

Adenine Count

1272 bp

Thymine Count

1091 bp

Guanine Count

1397 bp

Cytosine Count

1549 bp

Genome Length

5309 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilt proteinCXP35_RS16875Not AvailablePositive186200 - 1863856870.62
hypothetical proteinCXP35_RS18250Not AvailablePositive186448 - 18676511260.6
helix-turn-helix domain-containing proteinCXP35_RS16885Not AvailablePositive186827 - 18718613367.0
rna-guided endonuclease insq/tnpb family proteinCXP35_RS16890Not AvailablePositive187279 - 18770014937.2
antitoxin maze family proteinCXP35_RS16895Not AvailablePositive187910 - 1881288060.73
type ii toxin-antitoxin system pemk/mazf family toxinCXP35_RS16900Not AvailablePositive188125 - 18844811563.3
hypothetical proteinCXP35_RS16905Not AvailableNegative188478 - 1887539653.9
type ii toxin-antitoxin system phd/yefm family antitoxinCXP35_RS16910Not AvailablePositive188802 - 1890478926.77
type ii toxin-antitoxin system vapc family toxinCXP35_RS16915Not AvailablePositive189044 - 18943014185.1
phospholipase d family proteinCXP35_RS16920Not AvailableNegative189474 - 19153477102.2

Displaying genes 3401 – 3410 of 3600 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.