Komagataeibacter xylinus strain DSM 2325

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Komagataeibacter

Description

Komagataeibacter xylinus strain DSM 2325 is a Gram-negative, rod-shaped bacterium primarily found in various habitats associated with alcoholic beverages, including fermented beverages, wine vinegar, and spoiled wine. This strain can also inhabit the carposphere of climacteric and non-climacteric fruits, as well as vegetables and rotten fruit, indicating its adaptability to diverse environments. As an aerobic organism, K. xylinus DSM 2325 requires oxygen for growth, which aligns with its presence in open environments where fermentation processes occur. The bacterium has three replicons, suggesting a complex genetic structure that may contribute to its metabolic versatility. Notably, this strain has been identified in association with Malus domestica (apple), highlighting its potential role in the fermentation processes related to fruit-based products. The presence of K. xylinus in these environments may facilitate the production of cellulose, which is an important biopolymer used in various applications, including food and biotechnology. The ecological insight provided by the traits of K. xylinus DSM 2325 underscores its significance in the fermentation processes of fruit and beverages, where it likely plays a role in the microbial dynamics and quality of these products. Its ability to thrive in spoiled or rotten substrates also suggests a role in the decomposition processes, contributing to nutrient cycling in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusKomagataeibacter
SpeciesKomagataeibacter xylinus
Strainstrain DSM 2325

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatalcoholic beverages; carposphere; climacteric and non-climacteric fruit; fermented beverages; fruit; fruit juices; rotten fruit; spoiled wine; vegetables; wine vinegar
Biotic relationshipNot Available
Host(s)Malus domestica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Komagataeibacter xylinus strain DSM 2325 plasmid unnamed2,

Gene Summary

Adenine Count

1272 bp

Thymine Count

1091 bp

Guanine Count

1397 bp

Cytosine Count

1549 bp

Genome Length

5309 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ectoine/hydroxyectoine abc transporter substrate-binding protein ehubCXP35_RS00520Not AvailableNegative78756 - 7960430134.3
amino acid abc transporter atp-binding proteinCXP35_RS00525Not AvailableNegative79601 - 8037728702.0
n(2)-acetyl-l-2,4-diaminobutanoate deacetylase doebCXP35_RS00530Not AvailableNegative80405 - 8140635891.0
ectoine hydrolase doeaCXP35_RS00535Not AvailableNegative81429 - 8261044271.9
tonb-dependent receptorCXP35_RS00540Not AvailableNegative82678 - 8502986872.2
lrp/asnc family transcriptional regulatorCXP35_RS00545Not AvailableNegative85467 - 8594918359.2
nad-dependent succinate-semialdehyde dehydrogenaseCXP35_RS00550Not AvailablePositive86103 - 8759352877.7
aminotransferaseCXP35_RS00555Not AvailablePositive87605 - 8899349831.7
hydroxyectoine utilization dehydratase eutbCXP35_RS00560Not AvailablePositive89075 - 9004333640.0
cyclodeaminaseCXP35_RS00565Not AvailablePositive90060 - 9101634521.3

Displaying genes 181 – 190 of 3600 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.