Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Prodigiosinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Prodigiosinella |
| Species | Prodigiosinella confusarubida |
| Strain | strain ATCC 39006 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258865 bp
Thymine Count
1262010 bp
Guanine Count
1232112 bp
Cytosine Count
1218770 bp
Genome Length
4971757 bp
Protein-coding Genes
4260 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | SER39006_RS02885 | Not Available | Positive | 626488 - 626724 | 8333.32 |
| duf6789 family protein | SER39006_RS02890 | Not Available | Negative | 626865 - 627332 | 16752.9 |
| rna polymerase sigma factor | SER39006_RS02895 | Not Available | Negative | 627350 - 627856 | 19461.7 |
| hypothetical protein | SER39006_RS22765 | Not Available | Negative | 628297 - 628461 | 6288.48 |
| helix-turn-helix domain-containing protein | SER39006_RS02900 | Not Available | Negative | 628461 - 628718 | 9661.46 |
| nipsnap family protein | SER39006_RS02905 | Not Available | Positive | 629038 - 629376 | 13442.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | SER39006_RS02910 | Not Available | Negative | 629546 - 630910 | 49006.6 |
| membrane protein insertase yidc | SER39006_RS02915 | Not Available | Negative | 630982 - 632619 | 61169.0 |
| membrane protein insertion efficiency factor yidd | SER39006_RS02920 | Not Available | Negative | 632622 - 632879 | 9475.73 |
| ribonuclease p protein component | SER39006_RS02925 | Not Available | Negative | 632843 - 633202 | 13851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
