Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Prodigiosinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Prodigiosinella |
| Species | Prodigiosinella confusarubida |
| Strain | strain ATCC 39006 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258865 bp
Thymine Count
1262010 bp
Guanine Count
1232112 bp
Cytosine Count
1218770 bp
Genome Length
4971757 bp
Protein-coding Genes
4260 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | SER39006_RS01795 | Not Available | Positive | 385805 - 386614 | 30299.3 |
| pantetheine-phosphate adenylyltransferase | SER39006_RS01800 | Not Available | Negative | 386664 - 387143 | 17810.6 |
| glycosyltransferase | SER39006_RS01805 | Not Available | Negative | 387133 - 387912 | 29902.2 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | SER39006_RS01810 | Not Available | Negative | 387909 - 389186 | 47733.8 |
| glycosyltransferase family 4 protein | SER39006_RS01815 | Not Available | Positive | 389723 - 390853 | 42117.1 |
| glycosyltransferase family 9 protein | SER39006_RS01820 | Not Available | Positive | 390850 - 391956 | 41269.1 |
| o-antigen ligase family protein | SER39006_RS01825 | Not Available | Positive | 392067 - 393161 | 41155.4 |
| glycosyltransferase family 4 protein | SER39006_RS01830 | Not Available | Negative | 393310 - 394431 | 42117.7 |
| putative lipopolysaccharide heptosyltransferase iii | SER39006_RS01835 | Not Available | Negative | 394428 - 395513 | 40588.5 |
| lipopolysaccharide heptosyltransferase rfac | SER39006_RS01840 | Not Available | Negative | 395526 - 396497 | 36653.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
