Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Prodigiosinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Prodigiosinella |
| Species | Prodigiosinella confusarubida |
| Strain | strain ATCC 39006 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258865 bp
Thymine Count
1262010 bp
Guanine Count
1232112 bp
Cytosine Count
1218770 bp
Genome Length
4971757 bp
Protein-coding Genes
4260 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose abc transporter permease xylh | SER39006_RS01330 | Not Available | Negative | 284312 - 285496 | 41779.6 |
| xylose abc transporter atp-binding protein | SER39006_RS01335 | Not Available | Negative | 285474 - 287015 | 56792.2 |
| d-xylose abc transporter substrate-binding protein | SER39006_RS01340 | Not Available | Negative | 287223 - 288221 | 35917.3 |
| xylose isomerase | SER39006_RS01345 | Not Available | Positive | 288698 - 290017 | 49541.4 |
| xylulokinase | SER39006_RS01355 | Not Available | Positive | 290313 - 291770 | 53022.5 |
| isochorismatase family protein | SER39006_RS01360 | Not Available | Positive | 291993 - 292544 | 20720.7 |
| glxa family transcriptional regulator | SER39006_RS01365 | Not Available | Positive | 292552 - 293478 | 34577.0 |
| acyltransferase | SER39006_RS01370 | Not Available | Negative | 293481 - 294473 | 37272.4 |
| aldehyde dehydrogenase family protein | SER39006_RS01375 | Not Available | Negative | 294653 - 296191 | 56107.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | SER39006_RS01380 | Not Available | Positive | 296550 - 297341 | 28335.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
