Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Prodigiosinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Prodigiosinella |
| Species | Prodigiosinella confusarubida |
| Strain | strain ATCC 39006 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258865 bp
Thymine Count
1262010 bp
Guanine Count
1232112 bp
Cytosine Count
1218770 bp
Genome Length
4971757 bp
Protein-coding Genes
4260 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | SER39006_RS01075 | Not Available | Positive | 234802 - 235665 | 33211.9 |
| tyrosine-type recombinase/integrase | SER39006_RS01080 | Not Available | Positive | 235969 - 237246 | 48602.5 |
| hypothetical protein | SER39006_RS01085 | Not Available | Positive | 237347 - 237685 | 12872.5 |
| duf3368 domain-containing protein | SER39006_RS01090 | Not Available | Negative | 237818 - 238297 | 17989.0 |
| helix-turn-helix domain-containing protein | SER39006_RS01095 | Not Available | Negative | 238298 - 239350 | 39229.6 |
| hypothetical protein | SER39006_RS01100 | Not Available | Negative | 239836 - 239961 | 4667.69 |
| protein adenylyltransferase fic | SER39006_RS01105 | Not Available | Positive | 240323 - 241426 | 42028.7 |
| type ii toxin-antitoxin system hipa family toxin | SER39006_RS01110 | Not Available | Negative | 241548 - 242798 | 47122.5 |
| helix-turn-helix domain-containing protein | SER39006_RS01115 | Not Available | Negative | 242795 - 243100 | 11455.3 |
| nucleotidyl transferase abieii/abigii toxin family protein | SER39006_RS01120 | Not Available | Negative | 243531 - 244418 | 34207.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
