Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Prodigiosinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Prodigiosinella |
| Species | Prodigiosinella confusarubida |
| Strain | strain ATCC 39006 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258865 bp
Thymine Count
1262010 bp
Guanine Count
1232112 bp
Cytosine Count
1218770 bp
Genome Length
4971757 bp
Protein-coding Genes
4260 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | SER39006_RS00475 | Not Available | Positive | 105101 - 106063 | 34398.8 |
| arabinose-5-phosphate isomerase kdsd | SER39006_RS00480 | Not Available | Positive | 106096 - 107082 | 35391.2 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | SER39006_RS00485 | Not Available | Positive | 107150 - 107716 | 20266.7 |
| lps export abc transporter periplasmic protein lptc | SER39006_RS00490 | Not Available | Positive | 107713 - 108282 | 21046.1 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | SER39006_RS00495 | Not Available | Positive | 108260 - 108838 | 21228.2 |
| lps export abc transporter atp-binding protein | SER39006_RS00500 | Not Available | Positive | 108842 - 109567 | 26777.4 |
| rna polymerase factor sigma-54 | SER39006_RS00505 | Not Available | Positive | 109609 - 111042 | 53627.3 |
| ribosome hibernation promoting factor | SER39006_RS00510 | Not Available | Positive | 111066 - 111353 | 10940.1 |
| pts iia-like nitrogen regulatory protein ptsn | SER39006_RS00515 | Not Available | Positive | 111452 - 111925 | 17361.1 |
| rnase adapter rapz | SER39006_RS00520 | Not Available | Positive | 112119 - 112973 | 32504.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
