Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Prodigiosinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Prodigiosinella |
| Species | Prodigiosinella confusarubida |
| Strain | strain ATCC 39006 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258865 bp
Thymine Count
1262010 bp
Guanine Count
1232112 bp
Cytosine Count
1218770 bp
Genome Length
4971757 bp
Protein-coding Genes
4260 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail completion protein | SER39006_RS14855 | Not Available | Positive | 3267004 - 3267471 | 17855.4 |
| Baseplate assembly protein v | SER39006_RS14860 | Not Available | Positive | 3267749 - 3268390 | 22575.7 |
| Baseplate assembly protein | SER39006_RS14865 | Not Available | Positive | 3268387 - 3268734 | 12726.2 |
| Baseplate assembly protein j | SER39006_RS14870 | Not Available | Positive | 3268739 - 3269647 | 32604.5 |
| Tail fibers protein | SER39006_RS14875 | Not Available | Positive | 3269640 - 3270251 | 22553.7 |
| Tail fiber protein | SER39006_RS14880 | Not Available | Positive | 3270478 - 3271497 | 36300.7 |
| Tail fiber assembly protein | SER39006_RS14885 | Not Available | Positive | 3271497 - 3272111 | 22054.4 |
| Methyltransferase | SER39006_RS14890 | Not Available | Negative | 3272249 - 3272680 | 16006.5 |
| Gene 15 protein | SER39006_RS14895 | Not Available | Negative | 3272689 - 3273768 | 40978.7 |
| Isbm1, transposase orfb | SER39006_RS14905 | Not Available | Negative | 3274207 - 3274446 | 9259.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
