Paraburkholderia caledonica strain PHRS4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caledonica strain PHRS4 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This strain is notable for having two replicons, which are essential for its genetic stability and propagation. The genomic data for Paraburkholderia caledonica strain PHRS4 is accessible through the following accession numbers: NZ_CP024905.1 and NZ_CP024907.1. The presence of flagella suggests that Paraburkholderia caledonica strain PHRS4 can navigate its environment, which may enhance its ability to colonize various ecological niches. This motility could play a significant role in its interactions with other microorganisms and its adaptation to different habitats. Additionally, having two replicons may confer advantages in terms of genetic diversity and adaptability, potentially allowing the strain to respond to environmental pressures more effectively. Overall, the traits of Paraburkholderia caledonica strain PHRS4 highlight its potential ecological significance and adaptability within microbial communities. Understanding these characteristics can provide insights into its role in various ecosystems and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caledonica
Strainstrain PHRS4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caledonica strain PHRS4 chromosome PHRS4_A,

Gene Summary

Adenine Count

727832 bp

Thymine Count

727725 bp

Guanine Count

1200858 bp

Cytosine Count

1206268 bp

Genome Length

3862683 bp

Protein-coding Genes

3365 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal-phosphate-dependent aminotransferase family proteinCUJ87_RS02565Not AvailablePositive573284 - 57450743055.4
prepilin-type n-terminal cleavage/methylation domain-containing proteinCUJ87_RS02570Not AvailableNegative574527 - 578589149245.0
type vi secretion system protein tssl, long formCUJ87_RS02575Not AvailableNegative578620 - 57991847183.8
type vi secretion system baseplate subunit tsskCUJ87_RS02580Not AvailableNegative580072 - 58141849341.1
type vi secretion system lipoprotein tssjCUJ87_RS02585Not AvailableNegative581438 - 58195319090.9
hcp family type vi secretion system effectorCUJ87_RS02590Not AvailableNegative582055 - 58254017421.7
type vi secretion system contractile sheath large subunitCUJ87_RS02595Not AvailableNegative582640 - 58413356106.9
type vi secretion system contractile sheath small subunitCUJ87_RS02600Not AvailableNegative584188 - 58472419589.3
type vi secretion system atpase tsshCUJ87_RS02605Not AvailableNegative584787 - 58748997442.4
tagk domain-containing proteinCUJ87_RS02610Not AvailablePositive587956 - 58865424741.9

Displaying genes 511 – 520 of 3818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.