Burkholderia pyrrocinia strain mHSR5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia pyrrocinia strain mHSR5 is a bacterial isolate derived from petrol-contaminated soil, highlighting its potential role in bioremediation processes. This strain is characterized by possessing three distinct replicons, which may contribute to its adaptability and metabolic versatility in a contaminated environment. Additionally, B. pyrrocinia strain mHSR5 has been associated with the plant host Hordeum vulgare, commonly known as barley. This relationship suggests that the strain could play a role in promoting plant growth or enhancing the resilience of barley in contaminated soils. The ability to associate with a host plant may also indicate potential for use in phytoremediation strategies, where plants and associated microorganisms work together to detoxify polluted environments. The strain is represented by the following accessions: NZ_CP024902.1, NZ_CP024903.1, and NZ_CP024904.1, which provide genetic information crucial for further understanding its functional capabilities. Insights into the genomic features of B. pyrrocinia strain mHSR5 could aid in elucidating its mechanisms of degradation of hydrocarbons and other pollutants typically found in petrol-contaminated sites. Overall, the ecological significance of Burkholderia pyrrocinia strain mHSR5 lies in its potential to contribute to soil health and plant growth in contaminated environments, offering a dual benefit of bioremediation and agricultural support.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia pyrrocinia
Strainstrain mHSR5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpetrol contaminated soil
Biotic relationshipNot Available
Host(s)Hordeum vulgare
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia pyrrocinia strain mHSR5 chromosome mHSR5_B, complete

Gene Summary

Adenine Count

571369 bp

Thymine Count

571179 bp

Guanine Count

1129267 bp

Cytosine Count

1128671 bp

Genome Length

3400486 bp

Protein-coding Genes

3013 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsseCUJ89_RS20235Not AvailableNegative616148 - 61657315995.4
type vi secretion system atpase tsshCUJ89_RS20240Not AvailableNegative616590 - 61931398635.9
hcp family type vi secretion system effectorCUJ89_RS20245Not AvailableNegative619456 - 61994118292.5
ompa family proteinCUJ89_RS20250Not AvailableNegative620036 - 62175761736.0
dotu family type iv/vi secretion system proteinCUJ89_RS20255Not AvailableNegative621754 - 62248526600.9
type vi secretion system baseplate subunit tsskCUJ89_RS20260Not AvailableNegative622482 - 62383449795.6
type vi secretion system contractile sheath small subunitCUJ89_RS20265Not AvailablePositive624438 - 62495018957.8
type vi secretion system contractile sheath large subunitCUJ89_RS20270Not AvailablePositive625024 - 62655657430.5
type vi secretion system vgr family proteinCUJ89_RS20275Not AvailablePositive626639 - 62897886403.3
glycoside hydrolase family 108 proteinCUJ89_RS20280Not AvailablePositive628988 - 63143890182.6

Displaying genes 581 – 590 of 7348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.