Cobetia sp. ICG0124

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Cobetia

Description

Cobetia sp. ICG0124 is characterized by having a single replicon, as indicated by its genomic structure. The strain is cataloged under the accession number NZ_CP024893.1, which provides a reference for its genetic sequence and related studies. Cobetia species are typically known for their marine environments and have been associated with various ecological roles, including interactions with phytoplankton and other microorganisms. While specific ecological interactions for Cobetia sp. ICG0124 are not detailed in the provided traits, the single replicon may suggest a streamlined genomic organization that could be advantageous for survival in fluctuating marine conditions. The simplicity of having one replicon may also reflect an adaptation that allows Cobetia sp. ICG0124 to efficiently manage its genetic material in response to environmental stresses or competition in its habitat. Such adaptations could play a crucial role in its ecological niche, highlighting the importance of genomic architecture in microbial resilience and ecological dynamics. Understanding these traits further may contribute to insights into the ecological significance of Cobetia sp. ICG0124 within its marine environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusCobetia
SpeciesCobetia sp. ICG0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cobetia sp. ICG0124 chromosome.

Gene Summary

Adenine Count

616193 bp

Thymine Count

615390 bp

Guanine Count

1058419 bp

Cytosine Count

1055404 bp

Genome Length

3345506 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinCU110_RS15520Not AvailablePositive3316487 - 331826265421.1
abc transporter atp-binding proteinCU110_RS15525Not AvailablePositive3318259 - 332002264205.6
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjCU110_RS15530Not AvailableNegative3319940 - 332161962044.8
ompa family proteinCU110_RS15535Not AvailableNegative3321762 - 332242422635.7
radical sam family heme chaperone hemwCU110_RS15540Not AvailableNegative3322509 - 332370844516.9
rdgb/ham1 family non-canonical purine ntp pyrophosphataseCU110_RS15545Not AvailableNegative3323708 - 332432821709.6
luxr c-terminal-related transcriptional regulatorCU110_RS15550Not AvailablePositive3324377 - 332503625271.5
luxr c-terminal-related transcriptional regulatorCU110_RS15555Not AvailablePositive3325033 - 332571625605.6
csge family curli-type amyloid fiber assembly proteinCU110_RS15560Not AvailablePositive3325809 - 332623115468.2
curli assembly protein csgfCU110_RS15565Not AvailablePositive3326310 - 332672314543.9

Displaying genes 3211 – 3220 of 3238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.