Cobetia sp. ICG0124

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Cobetia

Description

Cobetia sp. ICG0124 is characterized by having a single replicon, as indicated by its genomic structure. The strain is cataloged under the accession number NZ_CP024893.1, which provides a reference for its genetic sequence and related studies. Cobetia species are typically known for their marine environments and have been associated with various ecological roles, including interactions with phytoplankton and other microorganisms. While specific ecological interactions for Cobetia sp. ICG0124 are not detailed in the provided traits, the single replicon may suggest a streamlined genomic organization that could be advantageous for survival in fluctuating marine conditions. The simplicity of having one replicon may also reflect an adaptation that allows Cobetia sp. ICG0124 to efficiently manage its genetic material in response to environmental stresses or competition in its habitat. Such adaptations could play a crucial role in its ecological niche, highlighting the importance of genomic architecture in microbial resilience and ecological dynamics. Understanding these traits further may contribute to insights into the ecological significance of Cobetia sp. ICG0124 within its marine environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusCobetia
SpeciesCobetia sp. ICG0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cobetia sp. ICG0124 chromosome.

Gene Summary

Adenine Count

616193 bp

Thymine Count

615390 bp

Guanine Count

1058419 bp

Cytosine Count

1055404 bp

Genome Length

3345506 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS13915Not AvailableNegative2998551 - 299942033183.6
acyl-coa thioesteraseCU110_RS13920Not AvailableNegative2999420 - 299987516271.5
phosphoribosylamine--glycine ligaseCU110_RS13925Not AvailableNegative2999956 - 300124845094.5
polyhydroxyalkanoate synthesis repressor pharCU110_RS13930Not AvailableNegative3001369 - 300183918351.1
16s rrna (uracil(1498)-n(3))-methyltransferaseCU110_RS13935Not AvailablePositive3001924 - 300264926908.0
deoxyribodipyrimidine photo-lyaseCU110_RS13940Not AvailableNegative3002541 - 300307719937.2
monovalent cation/h+ antiporter subunit aCU110_RS13945Not AvailablePositive3003552 - 3006344100968.0
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS13950Not AvailablePositive3006344 - 300667011240.0
monovalent cation/h+ antiporter subunit dCU110_RS13955Not AvailablePositive3006699 - 300824053782.3
na+/h+ antiporter subunit eCU110_RS13960Not AvailablePositive3008237 - 300873719069.8

Displaying genes 2881 – 2890 of 3238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.