Cobetia sp. ICG0124

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Cobetia

Description

Cobetia sp. ICG0124 is characterized by having a single replicon, as indicated by its genomic structure. The strain is cataloged under the accession number NZ_CP024893.1, which provides a reference for its genetic sequence and related studies. Cobetia species are typically known for their marine environments and have been associated with various ecological roles, including interactions with phytoplankton and other microorganisms. While specific ecological interactions for Cobetia sp. ICG0124 are not detailed in the provided traits, the single replicon may suggest a streamlined genomic organization that could be advantageous for survival in fluctuating marine conditions. The simplicity of having one replicon may also reflect an adaptation that allows Cobetia sp. ICG0124 to efficiently manage its genetic material in response to environmental stresses or competition in its habitat. Such adaptations could play a crucial role in its ecological niche, highlighting the importance of genomic architecture in microbial resilience and ecological dynamics. Understanding these traits further may contribute to insights into the ecological significance of Cobetia sp. ICG0124 within its marine environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusCobetia
SpeciesCobetia sp. ICG0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cobetia sp. ICG0124 chromosome.

Gene Summary

Adenine Count

616193 bp

Thymine Count

615390 bp

Guanine Count

1058419 bp

Cytosine Count

1055404 bp

Genome Length

3345506 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dihydrouridine(20/20a) synthase dusaCU110_RS13185Not AvailablePositive2827956 - 282896337512.6
peptide mfs transporterCU110_RS13190Not AvailablePositive2829246 - 283064349694.5
succinylglutamate desuccinylase/aspartoacylase family proteinCU110_RS13195Not AvailableNegative2830664 - 283170137340.8
sulfite exporter taue/safe family proteinCU110_RS13200Not AvailablePositive2831895 - 283266527655.7
dopa 4,5-dioxygenase family proteinCU110_RS13205Not AvailablePositive2832689 - 283303012889.2
crea family proteinCU110_RS13210Not AvailablePositive2833057 - 283354817622.2
pyridoxamine 5'-phosphate oxidase family proteinCU110_RS13215Not AvailablePositive2833725 - 283421618570.8
alcohol dehydrogenase adhpCU110_RS13220Not AvailableNegative2834366 - 283539435898.2
aldehyde dehydrogenase family proteinCU110_RS13225Not AvailableNegative2835480 - 283700055090.6
response regulatorCU110_RS13230Not AvailablePositive2837232 - 283803828451.0

Displaying genes 2731 – 2740 of 3238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.