Cobetia sp. ICG0124

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Cobetia

Description

Cobetia sp. ICG0124 is characterized by having a single replicon, as indicated by its genomic structure. The strain is cataloged under the accession number NZ_CP024893.1, which provides a reference for its genetic sequence and related studies. Cobetia species are typically known for their marine environments and have been associated with various ecological roles, including interactions with phytoplankton and other microorganisms. While specific ecological interactions for Cobetia sp. ICG0124 are not detailed in the provided traits, the single replicon may suggest a streamlined genomic organization that could be advantageous for survival in fluctuating marine conditions. The simplicity of having one replicon may also reflect an adaptation that allows Cobetia sp. ICG0124 to efficiently manage its genetic material in response to environmental stresses or competition in its habitat. Such adaptations could play a crucial role in its ecological niche, highlighting the importance of genomic architecture in microbial resilience and ecological dynamics. Understanding these traits further may contribute to insights into the ecological significance of Cobetia sp. ICG0124 within its marine environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusCobetia
SpeciesCobetia sp. ICG0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cobetia sp. ICG0124 chromosome.

Gene Summary

Adenine Count

616193 bp

Thymine Count

615390 bp

Guanine Count

1058419 bp

Cytosine Count

1055404 bp

Genome Length

3345506 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCU110_RS10535Not AvailableNegative2260700 - 226118517491.8
nad(p)h-hydrate dehydrataseCU110_RS10540Not AvailableNegative2261166 - 226250645682.2
nad(p)h-hydrate epimeraseCU110_RS17740Not AvailableNegative2262503 - 226287713742.5
trna epoxyqueuosine(34) reductase quegCU110_RS10550Not AvailablePositive2262924 - 226399440588.8
oligoribonucleaseCU110_RS10555Not AvailableNegative2264014 - 226458621438.6
small ribosomal subunit biogenesis gtpase rsgaCU110_RS10560Not AvailablePositive2264770 - 226578037273.6
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS10565Not AvailableNegative2265763 - 22659747658.24
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS17120Not AvailableNegative2265910 - 226677931298.9
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS16260Not AvailableNegative2266906 - 226748121585.4
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS10585Not AvailablePositive2267487 - 22677208972.46

Displaying genes 2181 – 2190 of 3238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.