Cobetia sp. ICG0124

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Cobetia

Description

Cobetia sp. ICG0124 is characterized by having a single replicon, as indicated by its genomic structure. The strain is cataloged under the accession number NZ_CP024893.1, which provides a reference for its genetic sequence and related studies. Cobetia species are typically known for their marine environments and have been associated with various ecological roles, including interactions with phytoplankton and other microorganisms. While specific ecological interactions for Cobetia sp. ICG0124 are not detailed in the provided traits, the single replicon may suggest a streamlined genomic organization that could be advantageous for survival in fluctuating marine conditions. The simplicity of having one replicon may also reflect an adaptation that allows Cobetia sp. ICG0124 to efficiently manage its genetic material in response to environmental stresses or competition in its habitat. Such adaptations could play a crucial role in its ecological niche, highlighting the importance of genomic architecture in microbial resilience and ecological dynamics. Understanding these traits further may contribute to insights into the ecological significance of Cobetia sp. ICG0124 within its marine environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusCobetia
SpeciesCobetia sp. ICG0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cobetia sp. ICG0124 chromosome.

Gene Summary

Adenine Count

616193 bp

Thymine Count

615390 bp

Guanine Count

1058419 bp

Cytosine Count

1055404 bp

Genome Length

3345506 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaCU110_RS08280Not AvailableNegative1790233 - 179087423222.4
crossover junction endodeoxyribonuclease ruvcCU110_RS08285Not AvailableNegative1790985 - 179156320244.4
aspartate--trna ligaseCU110_RS08290Not AvailableNegative1791686 - 179347366318.7
fmdb family zinc ribbon proteinCU110_RS08295Not AvailableNegative1793551 - 17937757943.43
nad(p)-dependent oxidoreductaseCU110_RS17945Not AvailablePositive1793952 - 179561660198.6
hypothetical proteinCU110_RS08305Not AvailableNegative1796080 - 179640312060.6
ribokinaseCU110_RS08310Not AvailablePositive1796574 - 179749432661.6
nucleoside hydrolaseCU110_RS08315Not AvailablePositive1797507 - 179846033520.2
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS08320Not AvailablePositive1798467 - 179954040934.9
lysr substrate-binding domain-containing proteinCU110_RS08325Not AvailableNegative1799549 - 180048134525.0

Displaying genes 1711 – 1720 of 3238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.