Cobetia sp. ICG0124

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Cobetia

Description

Cobetia sp. ICG0124 is characterized by having a single replicon, as indicated by its genomic structure. The strain is cataloged under the accession number NZ_CP024893.1, which provides a reference for its genetic sequence and related studies. Cobetia species are typically known for their marine environments and have been associated with various ecological roles, including interactions with phytoplankton and other microorganisms. While specific ecological interactions for Cobetia sp. ICG0124 are not detailed in the provided traits, the single replicon may suggest a streamlined genomic organization that could be advantageous for survival in fluctuating marine conditions. The simplicity of having one replicon may also reflect an adaptation that allows Cobetia sp. ICG0124 to efficiently manage its genetic material in response to environmental stresses or competition in its habitat. Such adaptations could play a crucial role in its ecological niche, highlighting the importance of genomic architecture in microbial resilience and ecological dynamics. Understanding these traits further may contribute to insights into the ecological significance of Cobetia sp. ICG0124 within its marine environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusCobetia
SpeciesCobetia sp. ICG0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cobetia sp. ICG0124


Gene Summary

Adenine Count

616193 bp

Thymine Count

615390 bp

Guanine Count

1058419 bp

Cytosine Count

1055404 bp

Genome Length

3345506 bp

Protein-coding Genes

3143 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome d ubiquinol oxidase subunit iiCU110_RS05795Not AvailableNegative1253861 - 125486836991.1
cytochrome ubiquinol oxidase subunit iCU110_RS05800Not AvailableNegative1254886 - 125630151770.8
plp-dependent aminotransferase family proteinCU110_RS05805Not AvailableNegative1256836 - 125825752297.2
urea abc transporter substrate-binding proteinCU110_RS05810Not AvailablePositive1258380 - 125965446200.4
urea abc transporter permease subunit urtbCU110_RS05815Not AvailablePositive1259790 - 126144258425.0
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseCU110_RS16005Not AvailablePositive1261446 - 126252239030.8
urea abc transporter atp-binding protein urtdCU110_RS16010Not AvailablePositive1262568 - 126339530578.0
urea abc transporter atp-binding subunit urteCU110_RS05825Not AvailablePositive1263434 - 126414426886.1
urease accessory protein uredCU110_RS05830Not AvailablePositive1264156 - 126499530858.0
urease subunit gammaCU110_RS05835Not AvailablePositive1265038 - 126534010916.4

Displaying genes 1181 – 1190 of 3238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.