Komagataeibacter xylinus strain xylinus

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Komagataeibacter

Description

Komagataeibacter xylinus strain xylinus is a Gram-negative, aerobic bacterium characterized by its rod shape. It is primarily found in various habitats associated with alcoholic beverages, including wine vinegar, spoiled wine, fermented beverages, and fruit juices. Additionally, it can inhabit the carposphere of climacteric and non-climacteric fruits, as well as vegetables and rotten fruit. This bacterium has a single replicon, which is indicative of its genomic structure. One notable host of K. xylinus is Malus domestica, commonly known as the domestic apple, which suggests a specific ecological interaction within this particular fruit species. K. xylinus plays a significant role in the fermentation processes occurring in alcoholic beverages and fruit products, contributing to the production of microbial cellulose. This cellulose can have various applications in food and material sciences. The presence of K. xylinus in spoiled wine and rotten fruit highlights its capacity to thrive in environments rich in organic matter and may also indicate its potential as a bioremediator in the context of food spoilage. Understanding the ecological niches and interactions of K. xylinus can provide insights into its utility in fermentation and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusKomagataeibacter
SpeciesKomagataeibacter xylinus
Strainstrain xylinus

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatalcoholic beverages; carposphere; climacteric and non-climacteric fruit; fermented beverages; fruit; fruit juices; rotten fruit; spoiled wine; vegetables; wine vinegar
Biotic relationshipNot Available
Host(s)Malus domestica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Komagataeibacter xylinus strain xylinus chromosome, complete

Gene Summary

Adenine Count

654801 bp

Thymine Count

653438 bp

Guanine Count

1129294 bp

Cytosine Count

1125781 bp

Genome Length

3563314 bp

Protein-coding Genes

3167 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rieske (2fe-2s) proteinCT154_RS13400Not AvailableNegative2952332 - 295266411948.3
aminopeptidaseCT154_RS13405Not AvailablePositive2952786 - 295403345165.2
hypothetical proteinCT154_RS13410Not AvailablePositive2954030 - 295461121086.4
glycosyltransferase family 4 proteinCT154_RS13415Not AvailableNegative2954729 - 295584740244.6
heparinase ii/iii family proteinCT154_RS13420Not AvailableNegative2955844 - 295753861209.8
ribulose-phosphate 3-epimeraseCT154_RS13425Not AvailableNegative2957576 - 295825323711.7
rsmb/nop family class i sam-dependent rna methyltransferaseCT154_RS13430Not AvailableNegative2958315 - 295964947439.4
yggs family pyridoxal phosphate-dependent enzymeCT154_RS13435Not AvailablePositive2959730 - 296043724815.8
potassium transporter kupCT154_RS13440Not AvailablePositive2960543 - 296253472353.7
radical sam family heme chaperone hemwCT154_RS13445Not AvailablePositive2962540 - 296373043572.7

Displaying genes 2681 – 2690 of 3265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0004070beta-D-Glc-(1->4)-alpha-D-Glc-di-trans,octa-cis-undecaprenyl diphosphateC67H110O17P2Chemical structure of beta-D-Glc-(1->4)-alpha-D-Glc-di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1249.549Da
Monoisotopic1248.722923Da
BASm0004071alpha-D-Man-(1->3)-beta-D-Glc-(1->4)-alpha-D-Glc-1-di-trans,octa-cis-undecaprenyl diphosphateC73H120O22P2Chemical structure of alpha-D-Man-(1->3)-beta-D-Glc-(1->4)-alpha-D-Glc-1-di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1411.69Da
Monoisotopic1410.775747Da
BASm0004072alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateC61H100O12P2Chemical structure of alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1087.408Da
Monoisotopic1086.6701Da
BASm0017296Guanosine diphosphate mannoseC16H25N5O16P2Chemical structure of Guanosine diphosphate mannose3123-67-9
Average605.3411Da
Monoisotopic605.077152801Da

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.