Chlamydia psittaci strain GIMC 2003:Cps25SM

Rod

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Chlamydiales

Family

Chlamydiaceae

Genus

Chlamydia

Description

Chlamydia psittaci strain GIMC 2003:Cps25SM is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This strain is noteworthy for having two replicons, which are essential for its genomic organization and function. It is known to infect Homo sapiens, where it can lead to health complications such as atypical pneumonia and severe community-acquired pneumonia (SCAP). The strain's genetic information is accessible through the GenBank accession numbers NZ_CP024453.1 and NZ_CP024454.1, which provide detailed insights into its genomic structure and potential pathogenic mechanisms. The association of C. psittaci with respiratory illnesses in humans emphasizes its relevance in clinical microbiology and public health. From a biological and ecological perspective, the ability of C. psittaci to cause respiratory infections highlights the importance of monitoring this pathogen, particularly in environments where human and animal interactions are frequent. Understanding its transmission dynamics and pathogenicity can inform prevention strategies and improve outcomes in affected populations.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia psittaci
Strainstrain GIMC 2003:Cps25SM

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Chlamydia psittaci strain GIMC 2003:Cps25SM
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chlamydia psittaci strain GIMC 2003:Cps25SM chromosome, complete

Gene Summary

Adenine Count

355421 bp

Thymine Count

355085 bp

Guanine Count

227237 bp

Cytosine Count

229114 bp

Genome Length

1166857 bp

Protein-coding Genes

984 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cest family type iii secretion system chaperoneCHPS25_RS00160Not AvailablePositive39141 - 3954514958.8
type iii secretion system inner membrane ring subunit sctdCHPS25_RS00165Not AvailablePositive39565 - 4199489366.5
duf5398 family proteinCHPS25_RS00170Not AvailablePositive42041 - 422929506.51
type iii secretion system protein cdsfCHPS25_RS00175Not AvailablePositive42316 - 425709234.12
hypothetical proteinCHPS25_RS00180Not AvailablePositive42589 - 4303816765.2
hypothetical proteinCHPS25_RS00185Not AvailablePositive43082 - 4375025013.4
type iii secretion system atpase sctnCHPS25_RS00190Not AvailablePositive43752 - 4508048303.4
hypothetical proteinCHPS25_RS00195Not AvailablePositive45101 - 4561920509.7
duf5421 family proteinCHPS25_RS00200Not AvailablePositive45610 - 4645831151.0
type iii secretion system cytoplasmic ring protein sctqCHPS25_RS00205Not AvailablePositive46471 - 4758641020.5

Displaying genes 31 – 40 of 1036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ScapCausesPMC7652912
Atypical pneumoniaCausesPMC11157216

Displaying health effects 1 – 2 of 2 in total