Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Sinorhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
| Strain | strain NXT3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | root nodules |
| Biotic relationship | Not Available |
| Host(s) | Lablab purpureus, Parasponia andersonii, Lotus japonicus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
733844 bp
Thymine Count
737373 bp
Guanine Count
1242970 bp
Cytosine Count
1252818 bp
Genome Length
3967005 bp
Protein-coding Genes
3722 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | NXT3_RS00105 | Not Available | Positive | 19399 - 20940 | 56099.8 |
| abc transporter permease | NXT3_RS00110 | Not Available | Positive | 20978 - 21955 | 34283.6 |
| zinc-binding alcohol dehydrogenase family protein | NXT3_RS00115 | Not Available | Positive | 21999 - 23021 | 35860.0 |
| amidohydrolase family protein | NXT3_RS00120 | Not Available | Positive | 23018 - 23854 | 30777.1 |
| polyhydroxyalkanoate depolymerase | NXT3_RS00125 | Not Available | Positive | 24081 - 25355 | 47855.9 |
| duf2852 domain-containing protein | NXT3_RS00130 | Not Available | Positive | 25537 - 25956 | 16346.5 |
| m48 family metallopeptidase | NXT3_RS00135 | Not Available | Positive | 26143 - 26898 | 28551.5 |
| phosphoribosylanthranilate isomerase | NXT3_RS00140 | Not Available | Positive | 27074 - 27748 | 23667.3 |
| tryptophan synthase subunit beta | NXT3_RS00145 | Not Available | Positive | 27745 - 28965 | 43688.4 |
| tryptophan synthase subunit alpha | NXT3_RS00150 | Not Available | Positive | 28971 - 29810 | 29407.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
