Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Sinorhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
| Strain | strain NXT3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | root nodules |
| Biotic relationship | Not Available |
| Host(s) | Lablab purpureus, Parasponia andersonii, Lotus japonicus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
733844 bp
Thymine Count
737373 bp
Guanine Count
1242970 bp
Cytosine Count
1252818 bp
Genome Length
3967005 bp
Protein-coding Genes
3722 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smr/muts family protein | NXT3_RS00055 | Not Available | Positive | 7438 - 8001 | 20513.9 |
| helix-turn-helix domain-containing protein | NXT3_RS00060 | Not Available | Positive | 7998 - 8375 | 13725.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | NXT3_RS00065 | Not Available | Positive | 8510 - 10945 | 88725.5 |
| nitroreductase family protein | NXT3_RS00070 | Not Available | Negative | 11050 - 11646 | 22312.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase | NXT3_RS00075 | Not Available | Positive | 11924 - 13378 | 51777.4 |
| aldolase/citrate lyase family protein | NXT3_RS00080 | Not Available | Positive | 13478 - 14278 | 28359.1 |
| gntr family transcriptional regulator | NXT3_RS00085 | Not Available | Negative | 14280 - 15158 | 34039.6 |
| uxaa family hydrolase | NXT3_RS00090 | Not Available | Positive | 15429 - 16934 | 52233.0 |
| aldo/keto reductase | NXT3_RS00095 | Not Available | Positive | 17112 - 18131 | 36624.1 |
| abc transporter substrate-binding protein | NXT3_RS00100 | Not Available | Positive | 18339 - 19328 | 34066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
