Sinorhizobium fredii strain NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii strain NXT3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility, facilitated by the presence of flagella. This strain thrives in mesophilic temperature ranges, which is typical for many soil-dwelling microorganisms. Notably, Sinorhizobium fredii strain NXT3 possesses two replicons, indicating a potential complexity in its genetic organization that could contribute to its adaptability and functional capabilities. This strain is known to establish symbiotic relationships with a variety of leguminous plants, including Lablab purpureus, Parasponia andersonii, Lotus japonicus, and Glycine max. Such associations are crucial as they enable nitrogen fixation, a process that enriches soil fertility and promotes plant growth. The ability of Sinorhizobium fredii strain NXT3 to effectively interact with multiple host plants highlights its ecological significance in agricultural systems, particularly in enhancing the nutrient uptake of crops and supporting sustainable farming practices. The presence of this strain in the rhizosphere can lead to improved soil health and reduced reliance on synthetic fertilizers, aligning with contemporary agricultural goals of sustainability and environmental stewardship. Overall, the traits of Sinorhizobium fredii strain NXT3 underline its importance in both microbiological research and practical applications in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
Strainstrain NXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii strain NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-arabinono-1,4-lactone oxidaseNXT3_RS01890Not AvailableNegative384021 - 38525645443.9
sdr family nad(p)-dependent oxidoreductaseNXT3_RS01895Not AvailableNegative385267 - 38603426166.6
pts iia-like nitrogen regulatory protein ptsnNXT3_RS01900Not AvailableNegative386235 - 38669916557.2
ribosome hibernation-promoting factor, hpf/yfia familyNXT3_RS01905Not AvailableNegative386871 - 38744321259.0
rna polymerase factor sigma-54NXT3_RS01910Not AvailableNegative387634 - 38919657364.9
lps export abc transporter atp-binding proteinNXT3_RS01915Not AvailableNegative389337 - 39014929703.2
lpta/osta family proteinNXT3_RS01920Not AvailableNegative390164 - 39072719554.3
lps export abc transporter periplasmic protein lptcNXT3_RS01925Not AvailableNegative390744 - 39141223992.9
signal peptide peptidase sppaNXT3_RS01930Not AvailablePositive391673 - 39263234751.0
integration host factor subunit betaNXT3_RS01935Not AvailablePositive392750 - 39305211279.3

Displaying genes 411 – 420 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.