Sinorhizobium fredii strain NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii strain NXT3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility, facilitated by the presence of flagella. This strain thrives in mesophilic temperature ranges, which is typical for many soil-dwelling microorganisms. Notably, Sinorhizobium fredii strain NXT3 possesses two replicons, indicating a potential complexity in its genetic organization that could contribute to its adaptability and functional capabilities. This strain is known to establish symbiotic relationships with a variety of leguminous plants, including Lablab purpureus, Parasponia andersonii, Lotus japonicus, and Glycine max. Such associations are crucial as they enable nitrogen fixation, a process that enriches soil fertility and promotes plant growth. The ability of Sinorhizobium fredii strain NXT3 to effectively interact with multiple host plants highlights its ecological significance in agricultural systems, particularly in enhancing the nutrient uptake of crops and supporting sustainable farming practices. The presence of this strain in the rhizosphere can lead to improved soil health and reduced reliance on synthetic fertilizers, aligning with contemporary agricultural goals of sustainability and environmental stewardship. Overall, the traits of Sinorhizobium fredii strain NXT3 underline its importance in both microbiological research and practical applications in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
Strainstrain NXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii strain NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ybhb/ybcl family raf kinase inhibitor-like proteinNXT3_RS01785Not AvailableNegative365315 - 36585718893.2
helix-turn-helix transcriptional regulatorNXT3_RS01790Not AvailableNegative365993 - 36685331768.6
gnat family n-acetyltransferaseNXT3_RS01795Not AvailableNegative366977 - 36748018443.3
2-polyprenylphenol 6-hydroxylaseNXT3_RS01800Not AvailableNegative367832 - 36940658610.1
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieNXT3_RS01805Not AvailableNegative369411 - 37018728564.3
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseNXT3_RS01810Not AvailablePositive370369 - 37125932188.8
enoyl-coa hydrataseNXT3_RS01815Not AvailablePositive371314 - 37208727496.7
30s ribosomal protein s20NXT3_RS01820Not AvailablePositive372278 - 3725449400.44
chromosomal replication initiator protein dnaaNXT3_RS01830Not AvailablePositive373653 - 37509553627.7
ycii family proteinNXT3_RS01835Not AvailablePositive375261 - 37563513640.2

Displaying genes 391 – 400 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.