Sinorhizobium fredii strain NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii strain NXT3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility, facilitated by the presence of flagella. This strain thrives in mesophilic temperature ranges, which is typical for many soil-dwelling microorganisms. Notably, Sinorhizobium fredii strain NXT3 possesses two replicons, indicating a potential complexity in its genetic organization that could contribute to its adaptability and functional capabilities. This strain is known to establish symbiotic relationships with a variety of leguminous plants, including Lablab purpureus, Parasponia andersonii, Lotus japonicus, and Glycine max. Such associations are crucial as they enable nitrogen fixation, a process that enriches soil fertility and promotes plant growth. The ability of Sinorhizobium fredii strain NXT3 to effectively interact with multiple host plants highlights its ecological significance in agricultural systems, particularly in enhancing the nutrient uptake of crops and supporting sustainable farming practices. The presence of this strain in the rhizosphere can lead to improved soil health and reduced reliance on synthetic fertilizers, aligning with contemporary agricultural goals of sustainability and environmental stewardship. Overall, the traits of Sinorhizobium fredii strain NXT3 underline its importance in both microbiological research and practical applications in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
Strainstrain NXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii strain NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme exporter protein ccmdNXT3_RS18830Not AvailablePositive3831581 - 38317576161.42
dsbe family thiol:disulfide interchange proteinNXT3_RS18835Not AvailablePositive3831754 - 383236521852.5
duf2585 domain-containing proteinNXT3_RS18840Not AvailableNegative3832625 - 383321821968.1
septation protein aNXT3_RS18845Not AvailableNegative3833215 - 383384723525.5
signal recognition particle-docking protein ftsyNXT3_RS18850Not AvailableNegative3834006 - 383567658047.7
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabNXT3_RS18855Not AvailableNegative3835692 - 383696646744.4
diaminopimelate epimeraseNXT3_RS18860Not AvailableNegative3836963 - 383786532500.4
mbl fold metallo-hydrolaseNXT3_RS18865Not AvailableNegative3837956 - 383896337548.7
marr family winged helix-turn-helix transcriptional regulatorNXT3_RS18870Not AvailablePositive3839090 - 383954217063.1
signal recognition particle proteinNXT3_RS18875Not AvailablePositive3839820 - 384138254596.8

Displaying genes 3721 – 3730 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.