Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Sinorhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
| Strain | strain NXT3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | root nodules |
| Biotic relationship | Not Available |
| Host(s) | Lablab purpureus, Parasponia andersonii, Lotus japonicus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
733844 bp
Thymine Count
737373 bp
Guanine Count
1242970 bp
Cytosine Count
1252818 bp
Genome Length
3967005 bp
Protein-coding Genes
3722 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | NXT3_RS09440 | Not Available | Positive | 1897453 - 1898217 | 28175.3 |
| Hypothetical protein | NXT3_RS09445 | Not Available | Positive | 1898217 - 1898819 | 21433.4 |
| Hypothetical protein | NXT3_RS09450 | Not Available | Positive | 1898827 - 1899240 | 14825.6 |
| Tail fiber protein | NXT3_RS09455 | Not Available | Positive | 1899237 - 1901423 | 79252.0 |
| Tail fiber protein | NXT3_RS09460 | Not Available | Positive | 1901493 - 1903814 | 82965.5 |
| Gp33 | NXT3_RS11355 | Not Available | Negative | 2293672 - 2294430 | 28617.4 |
| glycosyltransferase family 2 protein | NXT3_RS11360 | Not Available | Positive | 2294749 - 2295591 | 32417.2 |
| Hypothetical protein | NXT3_RS11365 | Not Available | Negative | 2295728 - 2296222 | 18100.7 |
| Putative tail fiber protein | NXT3_RS11370 | Not Available | Negative | 2296224 - 2297435 | 40352.6 |
| Structural protein | NXT3_RS11375 | Not Available | Negative | 2297526 - 2298875 | 48604.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
