Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Sinorhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
| Strain | strain NXT3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | root nodules |
| Biotic relationship | Not Available |
| Host(s) | Lablab purpureus, Parasponia andersonii, Lotus japonicus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
733844 bp
Thymine Count
737373 bp
Guanine Count
1242970 bp
Cytosine Count
1252818 bp
Genome Length
3967005 bp
Protein-coding Genes
3722 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion structural protein | NXT3_RS09385 | Not Available | Positive | 1889442 - 1889936 | 17414.5 |
| Structural protein | NXT3_RS09390 | Not Available | Positive | 1889936 - 1890301 | 12762.4 |
| Hypothetical protein | NXT3_RS31935 | Not Available | Positive | 1890784 - 1890948 | 5860.05 |
| Head morphogenesis protein | NXT3_RS09400 | Not Available | Positive | 1890948 - 1892000 | 38935.5 |
| Putative tail protein | NXT3_RS09405 | Not Available | Positive | 1892000 - 1892461 | 16707.6 |
| Tail terminator | NXT3_RS09415 | Not Available | Positive | 1892651 - 1893082 | 16048.4 |
| Tail collar domain | NXT3_RS09420 | Not Available | Positive | 1893139 - 1893870 | 24835.5 |
| Hypothetical protein | NXT3_RS09425 | Not Available | Positive | 1893879 - 1894292 | 14995.9 |
| Hypothetical protein | NXT3_RS32915 | Not Available | Positive | 1894511 - 1894639 | 4823.85 |
| Tail tape measure protein | NXT3_RS09435 | Not Available | Positive | 1894643 - 1897450 | 98165.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
