Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Sinorhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
| Strain | strain NXT3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | root nodules |
| Biotic relationship | Not Available |
| Host(s) | Lablab purpureus, Parasponia andersonii, Lotus japonicus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sinorhizobium fredii strain NXT3 chromosome, complete genome.
Gene Summary
Adenine Count
733844 bp
Thymine Count
737373 bp
Guanine Count
1242970 bp
Cytosine Count
1252818 bp
Genome Length
3967005 bp
Protein-coding Genes
3722 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | NXT3_RS00555 | Not Available | Positive | 122242 - 123039 | 28025.8 |
| thymidine phosphorylase | NXT3_RS00560 | Not Available | Positive | 123041 - 124384 | 46852.2 |
| tigr02281 family clan aa aspartic protease | NXT3_RS00565 | Not Available | Negative | 124345 - 124869 | 18007.6 |
| uracil phosphoribosyltransferase | NXT3_RS00570 | Not Available | Negative | 124999 - 125628 | 23314.5 |
| adenosine deaminase | NXT3_RS00575 | Not Available | Negative | 125726 - 126700 | 35437.1 |
| phosphopentomutase | NXT3_RS00580 | Not Available | Negative | 126697 - 127917 | 43885.1 |
| tade/tadg family type iv pilus assembly protein | NXT3_RS00585 | Not Available | Negative | 128043 - 128600 | 19860.5 |
| tade/tadg family type iv pilus assembly protein | NXT3_RS00590 | Not Available | Negative | 128626 - 129231 | 22245.5 |
| pilus assembly protein n-terminal domain-containing protein | NXT3_RS00595 | Not Available | Negative | 129388 - 129813 | 15429.4 |
| flp family type ivb pilin | NXT3_RS00600 | Not Available | Positive | 130065 - 130247 | 6405.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
