Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Sinorhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
| Strain | strain NXT3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | root nodules |
| Biotic relationship | Not Available |
| Host(s) | Lablab purpureus, Parasponia andersonii, Lotus japonicus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sinorhizobium fredii strain NXT3 chromosome, complete genome.
Gene Summary
Adenine Count
733844 bp
Thymine Count
737373 bp
Guanine Count
1242970 bp
Cytosine Count
1252818 bp
Genome Length
3967005 bp
Protein-coding Genes
3722 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | NXT3_RS07360 | Not Available | Positive | 1518100 - 1519410 | 48373.6 |
| quaternary ammonium compound efflux smr transporter suge | NXT3_RS07365 | Not Available | Positive | 1519572 - 1519886 | 10727.8 |
| atp12 family chaperone protein | NXT3_RS07370 | Not Available | Negative | 1519929 - 1520714 | 28463.8 |
| had-ia family hydrolase | NXT3_RS07375 | Not Available | Negative | 1520707 - 1521372 | 23701.7 |
| rlua family pseudouridine synthase | NXT3_RS07380 | Not Available | Negative | 1521372 - 1522364 | 36846.1 |
| duf1883 domain-containing protein | NXT3_RS07385 | Not Available | Positive | 1522512 - 1522823 | 11558.8 |
| s-formylglutathione hydrolase | NXT3_RS07390 | Not Available | Negative | 1522830 - 1523663 | 31018.8 |
| duf1345 domain-containing protein | NXT3_RS07395 | Not Available | Negative | 1523680 - 1524336 | 23295.3 |
| yaii/yqxd family protein | NXT3_RS07400 | Not Available | Negative | 1524364 - 1524804 | 15672.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | NXT3_RS07405 | Not Available | Negative | 1524880 - 1526007 | 39804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
