Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | TPEKDK363_RS05000 | Not Available | Positive | 1065148 - 1066170 | 37163.4 |
| diguanylate cyclase dgca | TPEKDK363_RS05010 | Not Available | Positive | 1066350 - 1067393 | 38697.1 |
| rhomboid family intramembrane serine protease | TPEKDK363_RS05015 | Not Available | Positive | 1067409 - 1068035 | 23419.6 |
| hypothetical protein | TPEKDK363_RS05505 | Not Available | Positive | 1068463 - 1068741 | 10771.0 |
| molecular chaperone htpg | TPEKDK363_RS05025 | Not Available | Negative | 1068765 - 1070684 | 72922.6 |
| aspartate--trna ligase | TPEKDK363_RS05035 | Not Available | Positive | 1070828 - 1072636 | 68630.5 |
| dmt family transporter | TPEKDK363_RS05040 | Not Available | Positive | 1072693 - 1073577 | 32367.2 |
| hypothetical protein | TPEKDK363_RS05045 | Not Available | Negative | 1073623 - 1074006 | 14196.3 |
| marc family protein | TPEKDK363_RS05050 | Not Available | Positive | 1074097 - 1074696 | 21707.7 |
| glycogen-binding domain-containing protein | TPEKDK363_RS05055 | Not Available | Negative | 1074732 - 1075436 | 25815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





