Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPEKDK363_RS04950 | Not Available | Negative | 1054506 - 1056125 | 59473.0 |
| iron transporter | TPEKDK363_RS04955 | Not Available | Negative | 1056260 - 1056874 | 22085.8 |
| ftr1 family iron permease | TPEKDK363_RS04960 | Not Available | Negative | 1057030 - 1058328 | 46639.1 |
| phenylalanine--trna ligase subunit alpha | TPEKDK363_RS04965 | Not Available | Positive | 1058464 - 1060125 | 61236.7 |
| flagellar biosynthesis anti-sigma factor flgm | TPEKDK363_RS04970 | Not Available | Negative | 1060177 - 1060458 | 10222.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | TPEKDK363_RS04975 | Not Available | Negative | 1060510 - 1061334 | 29533.9 |
| hypothetical protein | TPEKDK363_RS04980 | Not Available | Positive | 1061381 - 1062760 | 49190.3 |
| nif3-like dinuclear metal center hexameric protein | TPEKDK363_RS04985 | Not Available | Positive | 1062747 - 1063607 | 30884.1 |
| signal peptidase ii | TPEKDK363_RS04990 | Not Available | Positive | 1063604 - 1064197 | 21889.4 |
| tatd family hydrolase | TPEKDK363_RS04995 | Not Available | Positive | 1064367 - 1065140 | 28975.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





