Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h2o-forming nadh oxidase | TPEKDK363_RS04700 | Not Available | Positive | 1001364 - 1002701 | 48646.8 |
| nucleotidyltransferase family protein | TPEKDK363_RS04705 | Not Available | Positive | 1002774 - 1003826 | 37902.9 |
| pega domain-containing protein | TPEKDK363_RS04710 | Not Available | Negative | 1003770 - 1004792 | 36025.9 |
| Trna-ala | Not Available | Not Available | Positive | 1004944 - 1005016 | Not Available |
| helix-hairpin-helix domain-containing protein | TPEKDK363_RS04720 | Not Available | Positive | 1005116 - 1007452 | 85172.6 |
| Trna-thr | Not Available | Not Available | Positive | 1007554 - 1007626 | Not Available |
| flavodoxin | TPEKDK363_RS04730 | Not Available | Positive | 1007819 - 1008259 | 15794.2 |
| signal peptidase i | TPEKDK363_RS04735 | Not Available | Negative | 1008410 - 1009948 | 57650.7 |
| hypothetical protein | TPEKDK363_RS05490 | Not Available | Positive | 1010041 - 1010631 | 22216.3 |
| hypothetical protein | TPEKDK363_RS05545 | Not Available | Positive | 1011479 - 1012249 | 28194.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





