Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | TPEKDK363_RS04600 | Not Available | Negative | 984659 - 986071 | 51387.4 |
| alpha/beta hydrolase | TPEKDK363_RS04605 | Not Available | Negative | 986112 - 986993 | 32927.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | TPEKDK363_RS04610 | Not Available | Positive | 986995 - 988593 | 57880.9 |
| hypothetical protein | TPEKDK363_RS04615 | Not Available | Positive | 988586 - 988837 | 9659.82 |
| 30s ribosomal protein s16 | TPEKDK363_RS05540 | Not Available | Positive | 988800 - 989024 | 8793.75 |
| kh domain-containing protein | TPEKDK363_RS04625 | Not Available | Positive | 989180 - 989422 | 8686.59 |
| ribosome maturation factor rimm | TPEKDK363_RS04630 | Not Available | Positive | 989485 - 990009 | 18946.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | TPEKDK363_RS04635 | Not Available | Positive | 990006 - 990758 | 28120.6 |
| 50s ribosomal protein l19 | TPEKDK363_RS04640 | Not Available | Positive | 990730 - 991101 | 14192.5 |
| hypothetical protein | TPEKDK363_RS04645 | Not Available | Positive | 991098 - 992018 | 33816.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





