Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | TPEKDK363_RS04480 | Not Available | Positive | 954573 - 954980 | 14672.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | TPEKDK363_RS04485 | Not Available | Positive | 955027 - 955692 | 23648.6 |
| hd-gyp domain-containing protein | TPEKDK363_RS04490 | Not Available | Positive | 955697 - 956794 | 41907.9 |
| duf4340 domain-containing protein | TPEKDK363_RS04495 | Not Available | Negative | 956807 - 957757 | 37346.8 |
| gldg family protein | TPEKDK363_RS04500 | Not Available | Negative | 957763 - 959244 | 56141.6 |
| abc transporter permease | TPEKDK363_RS04505 | Not Available | Negative | 959241 - 959978 | 27472.4 |
| atp-binding cassette domain-containing protein | TPEKDK363_RS04510 | Not Available | Negative | 959956 - 960762 | 30046.5 |
| heat repeat domain-containing protein | TPEKDK363_RS04515 | Not Available | Negative | 960841 - 962292 | 53868.8 |
| lptf/lptg family permease | TPEKDK363_RS04520 | Not Available | Negative | 962309 - 963427 | 43001.4 |
| lptf/lptg family permease | TPEKDK363_RS04525 | Not Available | Negative | 963424 - 964521 | 40713.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





