Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase family protein | TPEKDK363_RS04420 | Not Available | Positive | 942376 - 943659 | 45735.2 |
| peptidoglycan dd-metalloendopeptidase family protein | TPEKDK363_RS04425 | Not Available | Negative | 943718 - 945358 | 58460.0 |
| upf0164 family protein | TPEKDK363_RS04430 | Not Available | Negative | 945392 - 946837 | 52372.4 |
| yifb family mg chelatase-like aaa atpase | TPEKDK363_RS04435 | Not Available | Negative | 946925 - 948856 | 68665.7 |
| flagellin | TPEKDK363_RS04450 | Not Available | Positive | 949185 - 950045 | 31176.2 |
| hypothetical protein | TPEKDK363_RS04455 | Not Available | Positive | 950060 - 950296 | 8735.89 |
| flagellin | TPEKDK363_RS04460 | Not Available | Positive | 950324 - 951181 | 31056.9 |
| flagellar filament capping protein flid | TPEKDK363_RS04465 | Not Available | Positive | 951479 - 953647 | 78373.6 |
| hypothetical protein | TPEKDK363_RS04470 | Not Available | Positive | 953659 - 954261 | 21703.0 |
| hypothetical protein | TPEKDK363_RS04475 | Not Available | Positive | 954258 - 954533 | 10568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





