Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4954 family protein | TPEKDK363_RS04370 | Not Available | Positive | 922451 - 924625 | 81915.1 |
| prolipoprotein diacylglyceryl transferase | TPEKDK363_RS04375 | Not Available | Negative | 924654 - 925652 | 38138.6 |
| p-loop ntpase | TPEKDK363_RS04380 | Not Available | Negative | 925803 - 926939 | 41240.5 |
| spoiie family protein phosphatase | TPEKDK363_RS04385 | Not Available | Negative | 926994 - 931595 | 172929.0 |
| hypothetical protein | TPEKDK363_RS04390 | Not Available | Negative | 931592 - 934975 | 124707.0 |
| upf0164 family protein | TPEKDK363_RS04395 | Not Available | Positive | 935131 - 936315 | 41669.6 |
| upf0164 family protein | TPEKDK363_RS04400 | Not Available | Positive | 936417 - 937646 | 43296.7 |
| upf0164 family protein | TPEKDK363_RS04405 | Not Available | Positive | 937728 - 939230 | 53411.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | TPEKDK363_RS04410 | Not Available | Negative | 939303 - 941210 | 69140.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | TPEKDK363_RS04415 | Not Available | Negative | 941447 - 942241 | 28417.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





