Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | TPEKDK363_RS04215 | Not Available | Negative | 890899 - 891705 | 29083.1 |
| mechanosensitive ion channel family protein | TPEKDK363_RS04220 | Not Available | Negative | 891786 - 892661 | 32180.1 |
| superoxide reductase domain-containing protein | TPEKDK363_RS04225 | Not Available | Negative | 892779 - 893165 | 13802.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | TPEKDK363_RS04230 | Not Available | Positive | 893562 - 895454 | 68107.0 |
| hypothetical protein | TPEKDK363_RS04235 | Not Available | Positive | 895451 - 895636 | 7260.95 |
| diadenylate cyclase cdaa | TPEKDK363_RS04240 | Not Available | Positive | 895623 - 896444 | 30334.3 |
| ybbr-like domain-containing protein | TPEKDK363_RS04245 | Not Available | Positive | 896422 - 897384 | 35306.6 |
| holo-acp synthase | TPEKDK363_RS04250 | Not Available | Positive | 897381 - 897758 | 14119.3 |
| duf2225 domain-containing protein | TPEKDK363_RS04255 | Not Available | Positive | 897755 - 898639 | 33795.3 |
| trna pseudouridine(38-40) synthase trua | TPEKDK363_RS04260 | Not Available | Positive | 898636 - 899421 | 29857.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





