Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase family protein | TPEKDK363_RS04115 | Not Available | Positive | 868875 - 870311 | 51625.4 |
| atp-dependent clp protease atp-binding subunit clpa | TPEKDK363_RS04120 | Not Available | Negative | 870372 - 872801 | 89333.1 |
| hypothetical protein | TPEKDK363_RS04125 | Not Available | Positive | 872847 - 873176 | 12262.5 |
| dhh family phosphoesterase | TPEKDK363_RS04130 | Not Available | Positive | 873190 - 874398 | 44580.1 |
| abc transporter atp-binding protein | TPEKDK363_RS04135 | Not Available | Positive | 874476 - 875639 | 42677.3 |
| ribonuclease catalytic domain-containing protein | TPEKDK363_RS04140 | Not Available | Negative | 875664 - 877766 | 77929.9 |
| peptidoglycan bridge formation glycyltransferase fema/femb family protein | TPEKDK363_RS04145 | Not Available | Negative | 877766 - 879163 | 52524.2 |
| 50s ribosomal protein l32 | TPEKDK363_RS04150 | Not Available | Positive | 879391 - 879579 | 7045.56 |
| acyl carrier protein | TPEKDK363_RS04155 | Not Available | Positive | 879640 - 879876 | 8899.44 |
| ribonuclease iii | TPEKDK363_RS04160 | Not Available | Positive | 879873 - 880637 | 28343.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





