Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | TPEKDK363_RS05365 | Not Available | Positive | 836964 - 837941 | 36962.5 |
| dead/deah box helicase | TPEKDK363_RS03970 | Not Available | Positive | 837986 - 839935 | 72382.3 |
| na/pi cotransporter family protein | TPEKDK363_RS03975 | Not Available | Negative | 839956 - 841737 | 65371.7 |
| hypothetical protein | TPEKDK363_RS03980 | Not Available | Positive | 841741 - 842565 | 30841.2 |
| Trna-lys | Not Available | Not Available | Positive | 843814 - 843886 | Not Available |
| s1c family serine protease | TPEKDK363_RS03985 | Not Available | Negative | 842605 - 843837 | 43473.1 |
| Trna-leu | Not Available | Not Available | Positive | 844030 - 844113 | Not Available |
| mgtc/sapb family protein | TPEKDK363_RS04000 | Not Available | Positive | 844146 - 844820 | 24087.2 |
| endonuclease iii | TPEKDK363_RS04005 | Not Available | Positive | 844900 - 845535 | 23420.6 |
| comf family protein | TPEKDK363_RS04010 | Not Available | Negative | 845612 - 846253 | 23997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





